Dissertation > Agricultural Sciences > Livestock, animal medicine,hunting,silkworm,bee > Livestock > Other livestock

Analysis of SNP and DIP from Transcriptional Expression Profiling of Cartilage Tissue in Antler of the Red Deer (Cervus Elaphus)

Author ShiZuo
Tutor LiuXueDong; ZhengDong
School Northeast Forestry University
Course Conservation and Utilization of Wild Fauna and Flora
Keywords DNA-seq SNP DIP Next generation sequencing Red Deer Alter Transcriptome
CLC S829.9
Type Master's thesis
Year 2012
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DNA-seq analysis was conducted to disclose next-generation sequencing-based transcriptome of cartilage from the red deer antler. Among110402contigs assembled by Reference assembly and De novo assembly, we detected597883SNPs in33771sites, including596233SNPs from the reference-assembly contigs and1650SNPs from the De novo assembly. Meanwhile14794DIPs were found in these contigs, ranging from1to5base pairs.

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